Embryo Prioritization Report — Physician Summary
PGT-A reanalysis · viability genes
- Cycle
- Nadia and Theo IVF cohort
- Clinic
- Partner clinic
- PGT laboratory
- Reticular lab
- Report date
- 2026-05-20
- Analysis
- PGT-A reanalysis + parental WGS
- Cohort
- 5 included · 1 excluded
- Genome build
- GRCh38
- Report ID
- reticular-demo-embryo-core-report
COHORT RESULT:3 euploid · 1 low-level mosaic · 1 aneuploid — recommended transfer order below
Existing PGT-A results were reanalyzed with parental whole-genome sequencing (no additional biopsy) to add single-gene viability findings to the chromosome and morphology data. The recommended order was reviewed by Reticular's genetic counselor; the transfer decision remains with the treating clinician and patient.
Test results — recommended transfer order
| Priority | Embryo | PGT-A result | Embryo viability gene risks | Morphology | Clinical assessment |
|---|---|---|---|---|---|
| 1 | Embryo 4Embryo E-4AA-7F3C | Euploid46,XX | CarrierDHCR7 c.964-1G>C · one copy · no effect on this embryo | 4AA · Day 5 | Best fit. No reportable viability-gene finding; DHCR7 carrier (one copy), no effect on this embryo or its priority. |
| 2 | Embryo 2Embryo E-5AB-2A91 | Euploid46,XY | Moderate riskTAZ (TAFAZZIN) c.646G>A (p.Gly216Arg) | 5AB · Day 5 | TAZ p.Gly216Arg (X-linked, hemizygous; moderate evidence for fetal loss); priority after Embryo 4. Genetics review advised; not an exclusion. |
| 3 | Embryo 7Embryo E-5BA-4C26 | Euploid46,XY | Higher riskTUBB8 c.686T>C (p.Val229Ala) | 5BA · Day 5 | TUBB8 p.Val229Ala (definitive evidence); priority after embryos without a viability-gene finding. Genetics review advised; not an exclusion. |
| 4 | Embryo 6Embryo E-4BA-8D42 | Low-level mosaicdup(4)(q28-qter) [mos] | No known risks | 4BA · Day 5 | No viability-gene finding; priority follows the low-level mosaic result. Transfer-appropriate after counseling. |
| 5 | Embryo 5Embryo E-3BB-1C57 | Aneuploid47,XY,+22 | Not assessed— | 3BB · Day 6 | Priority follows the aneuploid result; viability genes not assessed. |
| Excluded | Embryo 8Embryo E-3BB-6B18 | No resultInsufficient DNA for analysis | Not assessed | 4BB · Day 6 | Not analyzed — no chromosome or viability-gene result. Re-biopsy per clinic policy. |
Reportable viability variants — clinical detail
TUBB8 c.686T>C (p.Val229Ala) — heterozygous, PATHOGENIC
Detected in Embryo 7 · Maternal-effect / oocyte biology
Definitive riskoocyte/zygote/embryo maturation arrest
Gene function: TUBB8 encodes the β-tubulin isotype that forms the oocyte meiotic spindle. Pathogenic variants disrupt microtubule assembly and spindle function, impairing oocyte maturation, fertilization, and the embryo's first cleavage divisions.
Research evidence: TUBB8 variants were first described in dominant oocyte maturation arrest with functional microtubule disruption (Feng et al., NEJM 2016); later series broadened the phenotype to fertilization failure and pre-implantation embryonic arrest (Zheng et al., 2021). p.Val229Ala is recorded as pathogenic in ClinVar. TUBB8 is the most frequently implicated single gene in oocyte-maturation-arrest cohorts.
This cohort: A pathogenic TUBB8 variant was detected in a reproductive-biology gene with strong evidence for oocyte maturation problems and early embryo arrest. The finding informs prioritization and does not exclude transfer on its own.
TAZ (TAFAZZIN) c.646G>A (p.Gly216Arg) — hemizygous, PATHOGENIC
Detected in Embryo 2 · X-linked · one changed copy, inherited from the egg source
Moderate risk evidenceBarth syndrome (X-linked) — male fetal loss and stillbirth in family series
Gene function: TAZ (TAFAZZIN) encodes tafazzin, the cardiolipin-remodelling enzyme of the inner mitochondrial membrane. Loss of function causes Barth syndrome — dilated or non-compaction cardiomyopathy, skeletal myopathy, neutropenia and 3-methylglutaconic aciduria. X-linked recessive: males are affected, carrier females are unaffected.
Research evidence: c.646G>A (p.Gly216Arg) is recorded as pathogenic/likely pathogenic in ClinVar by multiple laboratories (Variation 426783). TAZ is on the Human Intolerome's Known-tier prenatal-lethal list, the panel's inclusion criterion for this gene group. In a UK cohort of 19 Barth kindreds, six showed male fetal loss, stillbirth or severe neonatal illness, with fetal cardiomyopathy and hydrops described (Steward et al., Prenat Diagn 2010). The syndrome is definitive; the fetal-loss association rests on family series — moderate evidence.
Why it is reported: Reported as the moderate-risk tier: a pathogenic X-linked variant inherited from the egg source, hemizygous in this male embryo, in a gene on the panel's pregnancy-survival list (Human Intolerome, Known tier, prenatal-lethal). The egg source is an unaffected carrier. It orders the embryo after embryos without a viability-gene finding and is not, on its own, a reason to set the embryo aside.
This cohort: A published TAZ variant was detected, inherited from the egg source. TAZ sits on the X chromosome and this embryo is male, so there is no second copy of the gene to make up for the change; families who carry it report more male pregnancy losses and stillbirths than expected. The finding informs prioritization and does not exclude transfer on its own.
Also relevant after birth: Barth syndrome (cardiomyopathy, neutropenia) in an affected male; cascade testing on the egg source's side.
Risk-evidence categories follow the ESHRE FeRGI gene–disease scoring (0–18; Limited 3–8, Moderate 9–12, Strong 13–15, Definitive 16–18): TUBB8 scores 17/18 (definitive) for oocyte/zygote/embryo maturation arrest; TAZ is not FeRGI-graded: Barth syndrome is definitive, and its link to fetal loss and stillbirth rests on family series (Steward 2010) — moderate evidence.
Carrier findings — no effect on the embryo
One pathogenic copy of a recessive gene the panel screens because two copies are lethal or severe. A carrier embryo is unaffected; the result is recorded for the future child and never enters the transfer order.
DHCR7 c.964-1G>C — heterozygous carrier, PATHOGENIC
Detected in Embryo 4 · Autosomal recessive · one copy, from the sperm source
Carrier · no effect on this embryoSmith-Lemli-Opitz syndrome (autosomal recessive) — one copy has no effect
Gene function: DHCR7 encodes 7-dehydrocholesterol reductase, the final enzyme of cholesterol synthesis. Biallelic pathogenic variants cause Smith-Lemli-Opitz syndrome.
Variant: c.964-1G>C is the most common SLOS allele, recorded as pathogenic in ClinVar; carrier frequency is roughly 1 in 50 in people of European ancestry.
This cohort: No viability-gene risk was identified. This embryo carries one copy of a DHCR7 variant, inherited from the sperm source, with a normal copy alongside it — a carrier result, recorded for the child's future rather than for this transfer.
Carrier reporting: the egg source does not carry a DHCR7 variant, so no embryo in this cohort can be affected. If transferred, the future child is a healthy carrier; the result is relevant to that child's own reproductive planning in adulthood and to cascade testing on the sperm source's side.
Method — how the transfer order is determined
- Chromosome result (PGT-A) sets the tier: euploid, then mosaic, then aneuploid. This is a hard floor — no other factor moves an embryo above a euploid.
- Reportable viability-gene findings order embryos within the same chromosome tier. Findings are ordered strongest evidence first — definitive, then moderate — and none is an exclusion criterion on its own. Carrier findings do not enter the order at all.
- Gardner morphology breaks any remaining ties.
PGT-A results are interpreted as reported by the originating laboratory; mosaic classification thresholds vary between laboratories and platforms. Every recommendation is reviewed by a genetic counselor before release.
Limitations
- Whole-chromosome aneuploid embryos rarely lead to a healthy live birth (rare exceptions: undetected mosaicism, segmental aneuploidy).
- Single-gene viability findings are prioritization context, not stand-alone exclusions. Gene–disease validity is tiered per finding; per-transfer positive predictive values are not yet established.
- Carrier findings (one copy of a recessive gene) and findings reported for context carry no viability-risk call; their relevance is to the future child's own health, and they never enter the transfer order.
Genetic counseling: included with this report — patients schedule directly at cal.com/team/reticular-bio, and the counselor is available to the clinical team for case review.
References
- ClinVar: TUBB8 p.Val229Ala
- Feng et al., NEJM 2016
- ClinVar: TAFAZZIN c.646G>A (p.Gly216Arg), Variation 426783
- Steward et al., Prenat Diagn 2010 — Barth syndrome: an X-linked cause of fetal cardiomyopathy and stillbirth
- Clarke et al., Orphanet J Rare Dis 2013 — Barth syndrome
- OMIM: Barth syndrome (TAFAZZIN)
- GeneReviews: Smith-Lemli-Opitz Syndrome
- ClinVar: DHCR7
- RPLdb — Human Intolerome database
- ESHRE FeRGI — Female Reproductive Genetics gene–disease evidence database
Appendix A — genes evaluated in the viability screen
Egg maturation & division (18)
TUBB8, PATL2, TRIP13, TACC3, CDC20, KIF11, TUBA4A, KIF18A, HAUS6, LHX8, TBPL2, ZFP36L2, PABPC1L, MLH3, KASH5, LHCGR, SYCP3, CCNB3
Fertilization (10)
ZP1, WEE2, PLCZ1, ZP2, ZP3, ZP4, ASTL, ACTL7A, ACTL9, IZUMO1R
The embryo's first days (12)
PADI6, TLE6, NLRP5, NLRP2, BTG4, CHEK1, OOEP, KPNA7, MOS, FBXO43, MEI4, PANX1
Molar pregnancy (5)
NLRP7, KHDC3L, MEI1, TOP6BL, REC114
Pregnancy survival — Human Intolerome, Known tier, prenatal-onset (182)
AAAS, ABCB4, ABCC6, ACO2, ACTA1, ACTG2, ADAMTS2, ADGRG6, ADSL, AGK, AGT, AGTR1, AK2, AKT2, ALDH18A1, ALG1, ALG8, ALG9, AMACR, AMT, ANK2, ANOS1, ANTXR2, ARHGAP31, ARID1B, ASCC1, ASNS, ASXL1, ATP6V1E1, ATP7A, B3GAT3, B4GAT1, BCKDHB, BCOR, BLTP1, BMPR2, BUB1B, C1QBP, CCBE1, CEP290, CHRND, CHRNE, CILK1, COG7, COL11A1, COL1A1, COL1A2, COX15, CRB2, CSPP1, CTSA, CYP26B1, CYP27A1, DLD, DNAH5, DNM2, DPAGT1, DYNC2H1, DYNC2LI1, EBP, ENG, ETFDH, EVC2, EXTL3, F10, F7, FAM111A, FANCL, FBN2, FLNA, FRAS1, G6PC1, GATA4, GLDN, GLE1, GLI2, GLI3, GLUL, GNAS, GNPAT, GNPTAB, GPC3, GPI, GPX4, GRIP1, GUCY2D, HADHA, HADHB, HBB, HCCS, HNF1B, HRAS, HSD17B10, HSPD1, HYLS1, IFT122, IFT80, IKBKG, ITGA8, ITGB4, JAM3, KCNH2, KCNJ2, KIAA1109 (BLTP1), KIF7, KMT2D, L1CAM, LONP1, MAGED2, MAGEL2, MECOM, MECP2, MED12, MIPEP, MKS1, MTOR, MYBPC3, MYH7, NAA10, NDUFAF5, NDUFB11, NDUFV1, NEK1, NEK8, NEU1, NPC2, NPHP3, NPHS1, NSDHL, OBSCN, OFD1, OTX2, P3H1, PHGDH, PIEZO1, PIGA, PIGW, PITX1, PLD1, POMGNT1, PORCN, PPIB, PRRX1, PTH1R, PTPN11, RAG1, RBM10, RET, RFT1, RIPK4, RIT1, RLIM, RMND1, SBDS, SCN5A, SCO2, SLC26A2, SOX18, SOX9, SPINK5, TAZ, TBX1, TBX19, TCTN2, THSD1, TMEM126B, TMEM231, TMEM67, TRIP11, TRPV4, TSEN54, TSPYL1, TTC37, TTC7A, TTN, TUFM, UBR1, WASHC5, WDR35, WDR73, WNT7A, WWOX
Survival genes, postnatal-onset — Known tier, reported as secondary findings (377)
ABAT, ABCA3, ACADM, ACE, ADAMTSL2, AIMP1, AKR1D1, ALDH1A3, ALDH7A1, ALPL, AMER1, ANK1, AP1S1, AP4M1, ARG1, ARHGDIA, ARV1, ARX, ASAH1, ASPA, ASS1, ATP6V1B1, ATP6V1B2, ATRX, B3GALT6, BCKDHA, BMPER, BOLA3, BRAT1, CANT1, CARD11, CASK, CCDC115, CD3D, CD3E, CD3G, CD40LG, CD96, CDKN1C, CDSN, CHAT, CHST14, CIT, CLCN7, CLMP, CLPB, COA6, COA8, COG6, COL2A1, COL3A1, COLEC10, COQ2, COQ9, COX10, CPOX, CPS1, CRLF1, CRPPA, CRTAP, CRYAB, CSF3R, CXCR4, CYP11B1, CYP11B2, CYP7B1, D2HGDH, DAG1, DBT, DDR2, DGUOK, DHCR7, DHDDS, DHFR, DIS3L2, DKC1, DLL3, DNAI1, DNAJC19, DNM1L, DOLK, DPM2, DPYD, DYNC2I1, DYNC2I2, EARS2, ECEL1, EDA, EDN3, EDNRB, EFEMP2, EIF2AK3, ELAC2, ELOVL4, EMG1, ENPP1, EPB41, EPCAM, EPG5, ERBB3, ERCC1, ESCO2, ETFB, ETHE1, EXOSC3, EXOSC8, EYA1, FANCB, FARS2, FBLN5, FBN1, FBP1, FBXL4, FCN3, FERMT3, FGFR3, FH, FHL1, FIG4, FKRP, FLAD1, FOXF1, FOXP3, FOXRED1, GALC, GATA6, GBA1, GBE1, GCSH, GFAP, GGCX, GLDC, GLIS3, GNAO1, GRIN1, GTPBP3, GUCY2C, GYS1, HAAO, HADH, HAX1, HELLS, HIBCH, HSPG2, IER3IP1, IFT43, IFT81, IGHMBP2, IL2RG, ISCA2, ITCH, ITGA3, ITGA6, ITPA, IVD, KCNA1, KCNJ10, KCNJ5, KCNT1, KDSR, KIF5A, KLHL41, KRT1, KRT10, KYNU, LAGE3, LAMA3, LAMC2, LARGE1, LBR, LGI4, LIAS, LIFR, LIPA, LIPT1, LIPT2, LMBRD1, LRPPRC, MANBA, MAPRE2, MBTPS2, MCCC2, MDH2, MESP2, MKKS, MLYCD, MMUT, MOCS1, MOCS2, MPC1, MPDU1, MPI, MPV17, MRPS22, MRPS34, MTM1, MTO1, MUSK, MYLK2, MYO18B, MYO5B, NAGA, NAGS, NAXE, NDUFA1, NDUFA11, NDUFAF1, NDUFAF2, NDUFAF3, NDUFAF4, NDUFB3, NDUFS1, NDUFS2, NDUFS4, NDUFS6, NEB, NEK9, NNT, NOTCH2, NR1H4, NTRK1, NUP62, OCLN, ORAI1, OSGEP, OSTM1, OTC, OTULIN, OXCT1, PAM16, PAX6, PC, PCCA, PCCB, PDGFRB, PDHB, PDHX, PDP1, PDSS2, PEPD, PET100, PEX10, PEX12, PEX13, PEX14, PEX16, PEX19, PEX2, PEX3, PEX5, PEX6, PEX7, PFKM, PHF8, PIGO, PIGV, PIGY, PIP5K1C, PKD1L1, PKD2, PKHD1, PKLR, PLA2G6, PLEC, PLPBP, PNPO, POLA1, POMC, POMGNT2, POMT2, POU1F1, PRPS1, PSAP, PTF1A, PUF60, PYGM, RAB27A, RAD51C, RAG2, RARS2, RBM8A, RFX6, RPSA, RRM2B, RTTN, RXYLT1, RYR1, SALL1, SAMHD1, SCN2A, SCN4A, SCNN1B, SCNN1G, SCO1, SDHA, SDHAF1, SDHD, SETBP1, SFTPA2, SFTPB, SGPL1, SH3PXD2B, SIK1, SIX3, SLC16A2, SLC19A3, SLC25A1, SLC25A19, SLC25A20, SLC25A22, SLC25A24, SLC25A26, SLC25A4, SLC25A46, SLC35D1, SLC39A14, SLC46A1, SLC52A3, SLC5A7, SLC6A9, SMARCAL1, SMARCD2, SMCHD1, SMG9, SMN1, SNRPB, SOX3, SPECC1L, SPEG, SPINT2, STAMBP, STAR, STAT1, STAT2, STIM1, STRA6, SUCLG1, SUMF1, SUOX, TBC1D24, TBCE, TBX20, TCIRG1, TCN2, TFAP2A, TFAP2B, TGDS, TIMMDC1, TINF2, TJP2, TK2, TMEM165, TMEM70, TOE1, TP53RK, TP63, TPI1, TPM3, TPRKB, TRAIP, TREX1, TRMT10C, TRMU, UBA1, UFM1, VDR, VKORC1, VMA21, VPS33B, VPS45, WARS2, XIAP, YARS2, ZIC2, ZIC3, ZMPSTE24, ZNF148
Blood clotting & pregnancy support (12)
F5, F2, SERPINC1, PROC, PROS1, ANXA5, NOS3, SERPINE1, F13A1, THBD, FGA, FLT1
616 genes listed. The survival groups are the “Known” evidence tier of the published 934-entry Human Intolerome (RPLdb); its Emerging and Candidate tiers (352 further genes) are also sequenced and reviewed but not listed individually. How findings act: the egg-biology groups (maturation, fertilization, first days, molar) act through the egg source's own genotype — a single copy for dominant genes such as TUBB8, both of her copies for recessive maternal-effect genes such as TLE6, PADI6, WEE2, or NLRP7 — while the survival groups act through the embryo's inherited genotype, requiring both partners to carry the same gene for a 1-in-4 embryo risk. Parental-infertility gene groups (ovarian reserve, hormone signaling, sperm) apply to the couple's pre-conception panel. Parental thrombophilia variants (F5, F2, SERPINC1, PROC, PROS1) are reported in the parents' own results, never as embryo findings.